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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_928023_928345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

928023 - 928345

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGATAAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

GTGTGATAAATT

Flanking Amino Acid:

DLGYQIYEVSGEGSSAVSTE

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

69.1

0.43

1.1

45.6

Minor 5ss

36.7

-1.5

52.2

44.4

Minor BPS

45.4

-0.2

2.2

65.42

45.4

Associated Gene:

Gene:

LARP4

Ensembl Gene ID:

ENSAPLG00000013661

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014284

916111 - 935077

18967