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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_9368_9676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9368 - 9676

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

CTTTCCCTACGC

Flanking Amino Acid:

YRKLLEGEENRLCGDNPASV

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

76.8

33.7

Major BPS

67.6

0.44

1.2

Major PPT

77.8

0.63

0.8

73.6

30.2

Minor 5ss

28.2

-2.5

3.1

38.3

46.6

Minor BPS

48.4

-0.1

2.2

66.79

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019239

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028150

6338 - 10090

3753