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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_964714_966693_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

964714 - 966693

Intron Length:

1980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TATTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CATGGTCTAATA

Flanking Amino Acid:

DTISYQDGEKVSLGENSSSF

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

86.8

0.83

0.7

81.4

30.1

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

43.3

-0.5

52.23

40.6

Associated Gene:

Gene:

LIMA1

Ensembl Gene ID:

ENSAPLG00000006766

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039005

947842 - 971834

23993

ENSAPLT00000025848

946987 - 971834

24848

ENSAPLT00000007053

950557 - 971834

21278