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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_9712_9818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9712 - 9818

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTTCATGCACA

Flanking Amino Acid:

CGDNPASVNVSVVGRTTIAG

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.2

37.5

Major BPS

78.6

0.71

79.6

32.9

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

39.9

-1.1

2.8

57.3

39.7

Minor BPS

47.6

-0.1

2.2

63.94

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019239

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028150

6338 - 10090

3753