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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000234.1_987049_987321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

987049 - 987321

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

AAGGGAATAACA

Flanking Amino Acid:

LHDASDFLLEAAKLANYAKY

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.88

0.6

88.7

20.6

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

40.3

-0.7

2.1

49.1

41.2

Associated Gene:

Gene:

CERS5

Ensembl Gene ID:

ENSAPLG00000006809

Chromosome:

PEDO01000234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007088

975223 - 990402

15180