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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_128378_128458_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

128378 - 128458

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCACCCCAT

5'SS Class:

weak_major

3'SS Sequence:

TGTGTCTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCCAC

U12 Branch Point Sequence:

TCTTCCCAGATA

Flanking Amino Acid:

PRGPQTPAGLRQFKCTNTNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.4

47.2

48.2

Major BPS

59.6

0.24

1.2

70.4

35.8

Major PPT

69.7

0.44

61.6

44.5

Minor 5ss

34.2

-1.8

4.3

55.9

48.3

Minor BPS

49.6

-0

66.66

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026068

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021950

128079 - 133810

5732