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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_129749_131985_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

129749 - 131985

Intron Length:

2237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGTCCTCC

5'SS Class:

weak_minor

3'SS Sequence:

CTGCATGTGGGAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

CCTGCAT

U12 Branch Point Sequence:

GCACCCCCACCT

Flanking Amino Acid:

GPGRPTLRVPPGPHPPDLPL

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

45.6

-0.2

1.3

35.6

Major BPS

50.1

1.4

43.2

Major PPT

-0.2

1.7

49.4

43.6

Minor 5ss

59.9

0.34

2.2

68.4

Minor BPS

-0.5

56.51

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019820

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039372

127087 - 132506

5420