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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_136752_136839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136752 - 136839

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CCCTCGCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

CCCCACTCACCT

Flanking Amino Acid:

VIPSPTASAVVPTTDTCDLV

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

64.9

0.37

29.8

Major PPT

66.9

0.38

0.8

33.4

Minor 5ss

29.4

-2.4

3.2

40.9

45.4

Minor BPS

42.6

-0.4

1.9

54.17

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023380

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029399

134237 - 138512

4276