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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_181062_181175_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181062 - 181175

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCATC

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTCTCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

TAGCCCTGAACC

Flanking Amino Acid:

KAEKSTTDDKNKKPQPGMRG

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.9

36.9

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

66.1

0.36

63.7

37.2

Minor 5ss

50.2

0.01

2.5

68.8

42.2

Minor BPS

65.6

0.47

1.5

70.59

Associated Gene:

Gene:

STAC3

Ensembl Gene ID:

ENSAPLG00000004189

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004298

179750 - 184594

4845