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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_181871_182128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181871 - 182128

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

CCCCAACTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGCCAT

U12 Branch Point Sequence:

CCCCCCCCAACT

Flanking Amino Acid:

VEMQRCFGKIPPGFRRAYSS

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.3

67.6

37.6

Major BPS

48.8

-0

1.5

58.2

48.3

Major PPT

0.23

0.8

50.1

32.6

Minor 5ss

31.4

-2.1

3.2

42.2

38.9

Minor BPS

47.2

-0.1

1.9

62.31

47.2

Associated Gene:

Gene:

STAC3

Ensembl Gene ID:

ENSAPLG00000004189

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004298

179750 - 184594

4845