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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_183092_183858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

183092 - 183858

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTCCCCTGGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGCCAA

U12 Branch Point Sequence:

CTAGCCAACACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.3

40.2

Major BPS

48.1

-0.1

1.3

56.4

40.6

Major PPT

72.9

0.51

0.9

70.1

30.7

Minor 5ss

33.9

-1.8

3.1

37.1

40.4

Minor BPS

40.6

-0.7

2.3

51.47

45.5

Associated Gene:

Gene:

STAC3

Ensembl Gene ID:

ENSAPLG00000004189

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004298

179750 - 184594

4845