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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_185681_187183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

185681 - 187183

Intron Length:

1503

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCATCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGTCTTTCCATC

Flanking Amino Acid:

ASTDLGTSDVVLGRVLEVTD

Intron Amino Acid Position:

938

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.9

1.15

0.7

87.7

28.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

79.2

0.66

0.8

73.7

29.6

Minor 5ss

22.7

-3.1

3.9

33.8

42.3

Minor BPS

44.6

-0.4

1.8

55.98

36.8

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585