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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_187947_188131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

187947 - 188131

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAGA

5'SS Class:

major

3'SS Sequence:

CTGCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

AGTGTCTGACCC

Flanking Amino Acid:

DLYNPDTSAQASTQLNSPIT

Intron Amino Acid Position:

828

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

64.2

41.4

Major BPS

63.7

0.34

1.2

41.8

Major PPT

71.4

0.48

0.8

65.4

30.4

Minor 5ss

37.8

-1.4

3.1

49.1

46.7

Minor BPS

47.3

-0.2

1.8

57.84

40.9

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585