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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_188302_189045_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

188302 - 189045

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGCAA

U12 Branch Point Sequence:

TGGGCAATACTG

Flanking Amino Acid:

SPPQMQQQYSGVSPSGPGVV

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

44.3

-0.3

1.5

49.1

46.3

Major PPT

76.9

0.6

0.7

68.7

31.7

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

38.8

-0.9

41.86

43.1

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585