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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_189599_189987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

189599 - 189987

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCATC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTACAT

U12 Branch Point Sequence:

CCTCCCTGCACA

Flanking Amino Acid:

VQYTPLPSYQVPVANESQSV

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

76.2

39.9

Major BPS

52.4

0.06

1.3

62.9

43.3

Major PPT

69.2

0.43

0.9

63.4

31.4

Minor 5ss

42.5

-0.8

3.2

59.7

45.1

Minor BPS

49.2

-0

61.44

44.5

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585