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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_194374_197530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194374 - 197530

Intron Length:

3157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGGT

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCAAC

U12 Branch Point Sequence:

TCTCTCTTCAAG

Flanking Amino Acid:

GSTASRTSRAGLVLGAPEAC

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

60.8

43.9

Major BPS

54.2

0.1

1.2

62.7

32.2

Major PPT

76.7

0.6

75.4

33.4

Minor 5ss

29.9

-2.3

3.8

47.5

47.9

Minor BPS

48.6

-0.2

1.9

57.38

44.1

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585