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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_201602_201978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201602 - 201978

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

GTTCTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTCTAATAAGA

Flanking Amino Acid:

VIINKTSNTRIPEQRFSEHI

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

60.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.3

0.75

0.8

77.6

31.2

Minor 5ss

-2.2

3.6

45.2

Minor BPS

44.1

-0.4

2.1

58.44

40.9

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585