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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_20211_23481_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20211 - 23481

Intron Length:

3271

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCGTCTCTG

5'SS Class:

weak_major

3'SS Sequence:

GGGGTGACTACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTGAC

U12 Branch Point Sequence:

TTGACCTGCACC

Flanking Amino Acid:

CVPFRVGVPIRVLVPGLRNT

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.4

49.4

Major BPS

66.4

0.41

58.7

38.1

Major PPT

57.2

0.16

1.1

44.9

Minor 5ss

34.2

-1.8

49.5

46.8

Minor BPS

52.5

0.06

68.12

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029877

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019871

17552 - 23789

6238