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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_203236_203957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

203236 - 203957

Intron Length:

722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

CTTTTTTTGACA

Flanking Amino Acid:

FLVNTLKKNPRDRMMLLKLE

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

0.57

73.6

28.6

Major PPT

85.3

0.79

0.9

83.2

31.9

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

72.4

0.7

1.1

77.15

33.9

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004488

184337 - 208921

24585

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672