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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_204037_205207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

204037 - 205207

Intron Length:

1171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGGTGC

5'SS Class:

major

3'SS Sequence:

ATTGTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GTTTTGTTAATT

Flanking Amino Acid:

DKAPRKMLSRDSSQEYTDST

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.3

64.8

42.3

Major BPS

84.4

0.85

34.5

Major PPT

80.5

0.69

0.9

77.4

41.2

Minor 5ss

32.5

-2

3.2

44.8

Minor BPS

65.1

0.55

83.97

37.3

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585