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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_205335_205896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

205335 - 205896

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCCA

5'SS Class:

major

3'SS Sequence:

TGTTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAC

U12 Branch Point Sequence:

TGACTCAGACCA

Flanking Amino Acid:

PFVDGLLESQDIIQLHVSCP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

62.5

43.9

Major BPS

54.8

0.12

1.1

46.8

37.9

Major PPT

84.7

0.78

0.9

76.9

42.1

Minor 5ss

36.8

-1.5

3.3

48.2

47.5

Minor BPS

42.1

-0.6

1.8

52.45

38.6

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020823

184337 - 208921

24585

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585