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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_205984_207685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

205984 - 207685

Intron Length:

1702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

GATATCTTAACT

Flanking Amino Acid:

SHGHARKRAKSNSKLKLVRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.8

35.2

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

-1.5

3.6

54.5

49.7

Minor BPS

74.5

0.85

1.2

82.82

37.6

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585

ENSAPLT00000020823

184337 - 208921

24585