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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_207728_208725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

207728 - 208725

Intron Length:

998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TCTTTCTCTACA

Flanking Amino Acid:

EEISVRQESQRRTSSHGHAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

75.3

40.8

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

89.2

0.88

0.6

84.1

24.1

Minor 5ss

39.7

-1.2

2.8

49.5

46.5

Minor BPS

56.8

0.21

1.9

71.02

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018202

184337 - 236008

51672

ENSAPLT00000004488

184337 - 208921

24585