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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_208922_235735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

208922 - 235735

Intron Length:

26814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

CCTTCTGTCACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.8

38.7

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

75.4

0.57

0.9

72.2

32.4

Minor 5ss

29.7

-2.3

2.6

33.4

41.8

Minor BPS

46.9

-0.2

2.4

60.93

45.2

Associated Gene:

Gene:

R3HDM2

Ensembl Gene ID:

ENSAPLG00000004298

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018202

184337 - 236008

51672