Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_244538_245962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

244538 - 245962

Intron Length:

1425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCCTGTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

ACCTCCTGACTC

Flanking Amino Acid:

HYEILSFAESGSSTSRRTLL

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

72.9

31.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

65.9

0.36

60.4

40.3

Minor 5ss

33.6

-1.9

41.1

45.4

Minor BPS

49.4

-0

1.7

57.03

42.2

Associated Gene:

Gene:

INHBC

Ensembl Gene ID:

ENSAPLG00000024015

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045476

243712 - 246705

2994