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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_254241_254988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

254241 - 254988

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

TCAGCATTCACC

Flanking Amino Acid:

GYEIISFAEPEPTSPSGTGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

69.9

0.5

31.5

Major PPT

84.1

0.77

0.7

81.4

23.7

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

47.7

-0.2

2.1

60.03

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026069

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021568

253952 - 256520

2569