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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_257720_259448_F

Intron Information:

Intron Rank:

131945

Intron Class:

major

Intron Phase:

Intron Coordinates:

257720 - 259448

Intron Length:

1729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGCACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAAAT

U12 Branch Point Sequence:

TTTCCCTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

35.3

Major BPS

54.8

0.12

1.3

62.7

40.5

Major PPT

65.6

0.35

0.9

58.2

37.6

Minor 5ss

36.6

-1.5

3.3

47.9

47.8

Minor BPS

71.2

0.74

1.5

88.48

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020841

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043348

257494 - 260650

3157