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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_274511_274768_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

274511 - 274768

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACC

5'SS Class:

major

3'SS Sequence:

TTGCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TGCTCATCATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

65.8

40.2

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

88.4

0.86

0.7

84.2

30.7

Minor 5ss

33.8

-1.8

3.1

43.2

44.2

Minor BPS

48.4

-0

2.1

70.47

45.8

Associated Gene:

Gene:

GLI1

Ensembl Gene ID:

ENSAPLG00000024305

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042248

273743 - 281564

7822