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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_276172_276653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

276172 - 276653

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGATGG

5'SS Class:

major

3'SS Sequence:

CTTGCCTGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

CTTGCCTGCACA

Flanking Amino Acid:

HTGEKPHKCTFEGCNKAYSR

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

59.8

41.8

Major BPS

0.55

1.1

63.4

44.3

Major PPT

0.45

64.1

36.7

Minor 5ss

32.4

-2

39.2

Minor BPS

51.1

0.03

2.1

67.78

44.7

Associated Gene:

Gene:

GLI1

Ensembl Gene ID:

ENSAPLG00000024305

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042248

273743 - 281564

7822