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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_278040_278291_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

278040 - 278291

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGACTG

5'SS Class:

major

3'SS Sequence:

CTTCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CCTGCTCTAACT

Flanking Amino Acid:

GLNLPVISGAGLPGEVPGIS

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

62.8

43.3

Major BPS

72.3

0.55

73.3

28.9

Major PPT

88.1

0.86

0.7

80.4

31.6

Minor 5ss

30.6

-2.2

3.2

40.3

45.3

Minor BPS

55.2

0.24

1.8

71.75

45.6

Associated Gene:

Gene:

GLI1

Ensembl Gene ID:

ENSAPLG00000024305

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042248

273743 - 281564

7822