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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_301000_301825_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

301000 - 301825

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCCCTTTAA

5'SS Class:

weak_major

3'SS Sequence:

CTGCCTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACGAT

U12 Branch Point Sequence:

CTGCAGGTGACG

Flanking Amino Acid:

LAAGPAGGLPGWE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.4

40.8

Major BPS

48.7

-0

1.4

46.5

46.6

Major PPT

64.9

0.34

1.1

60.7

40.2

Minor 5ss

23.2

-3.1

3.6

23.3

37.1

Minor BPS

35.2

-1.3

2.5

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001411

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001402

300990 - 302441

1452