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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_303792_303886_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
303792 - 303886

Intron Length:
95

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGCGTGGC

5'SS Class:
major

3'SS Sequence:
CCTCCCCCCCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GACTCAA

U12 Branch Point Sequence:
AGGGACTCAACC

Flanking Amino Acid:
RQYHQLLEKVRIRDALRCIL

Intron Amino Acid Position:
605

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71
0.5
1.1
58.1
41.5

Major BPS
60.2
0.25
1.2
63.6
35.5

Major PPT
71
0.47
0.8
61.5
29

Minor 5ss
27
-2.6
3.2
34.5
41.9

Minor BPS
47.4
-0.2
1.8
55.06
42.6

Associated Gene:

Gene:
MARS1

Ensembl Gene ID:

Chromosome:
PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

302578 - 307621
5044

302578 - 307621
5044