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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_305534_305691_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
305534 - 305691

Intron Length:
158

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTGAGCTGC

5'SS Class:
major

3'SS Sequence:
TGGGCTTTTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAC

U12 Branch Point Sequence:
TTTTTCTGGGCT

Flanking Amino Acid:
FGRTTTPHQTTIAQDIFQRL

Intron Amino Acid Position:
269

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.2
0.41
1.3
60.1
41.9

Major BPS
71.3
0.53
1.2
63.1
44.5

Major PPT
71.5
0.48
0.9
65.7
40.9

Minor 5ss
40.1
-1.1
3
49.1
41

Minor BPS
45.9
-0.2
3.5
83.34
37.9

Associated Gene:

Gene:
MARS1

Ensembl Gene ID:

Chromosome:
PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

302578 - 307621
5044

302578 - 307621
5044