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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_313579_313674_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
313579 - 313674

Intron Length:
96

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAACGCCG

5'SS Class:
major

3'SS Sequence:
ATGCTTCGGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTTAC

U12 Branch Point Sequence:
CCCCCCCCACCA

Flanking Amino Acid:
GLGGSKLGTKRTLPKKYFEE

Intron Amino Acid Position:
472

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.2
57.9
46.7

Major BPS
68.8
0.47
1.2
63.4
44

Major PPT
61
0.25
1.1
54.6
45.2

Minor 5ss
36.6
-1.5
3.3
48.4
47.3

Minor BPS
40
-0.7
2
45.3
43.7

Associated Gene:

Gene:
PFKM

Ensembl Gene ID:

Chromosome:
PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

311227 - 321259
10033