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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_419559_419655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

419559 - 419655

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATTG

Flanking Amino Acid:

VPVGPNTFQSRLPLPEQWRG

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

1.1

0.4

13.8

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

56.6

0.07

1.6

61.8

41.5

Associated Gene:

Gene:

C12orf10

Ensembl Gene ID:

ENSAPLG00000030654

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027575

416430 - 420842

4413