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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_422472_423251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

422472 - 423251

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GCAGCCTCACAG

Flanking Amino Acid:

TGERLAVIIRGNPDSPGSQT

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

75.3

40.8

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

78.3

0.64

0.7

25.1

Minor 5ss

39.7

-1.2

2.8

49.5

46.5

Minor BPS

40.5

-0.8

1.9

38.39

Associated Gene:

Gene:

AAAS

Ensembl Gene ID:

ENSAPLG00000029097

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031668

419598 - 428801

9204