Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_425214_425861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

425214 - 425861

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTGCCCTTCATC

Flanking Amino Acid:

DDSIRVYNSSSATIPSLKHR

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

0.62

1.1

77.2

Major PPT

81.4

0.71

0.7

80.1

25.3

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

0.36

1.8

71.55

40.1

Associated Gene:

Gene:

AAAS

Ensembl Gene ID:

ENSAPLG00000029097

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024037

419598 - 428801

9204