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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_426567_426671_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
426567 - 426671

Intron Length:
105

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGTGGG

5'SS Class:
major

3'SS Sequence:
GTGCCCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCCCAT

U12 Branch Point Sequence:
GCCGTCCCATCG

Flanking Amino Acid:
KEIASAEEEEGLQWLKTGSS

Intron Amino Acid Position:
104

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
63.1
43.4

Major BPS
54.5
0.11
1.4
66.4
42.2

Major PPT
65.9
0.36
0.9
58.5
33

Minor 5ss
26.2
-2.7
2.9
22.9
37.3

Minor BPS
35.2
-1.2
1.9
31.99
40.9

Associated Gene:

Gene:
AAAS

Ensembl Gene ID:

Chromosome:
PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

419598 - 428801
9204

419598 - 428801
9204

419598 - 428801
9204