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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000235.1_46014_46810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46014 - 46810

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATGAC

U12 Branch Point Sequence:

CTGGCCATGACC

Flanking Amino Acid:

PDNRSCKAKNEPVDRPPVLL

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

33.2

Major BPS

49.9

-0

1.2

37.8

Major PPT

85.1

0.79

0.7

77.2

31.5

Minor 5ss

39.3

-1.2

49.1

41.1

Minor BPS

51.5

0.03

1.8

62.35

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022940

Chromosome:

PEDO01000235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037521

30757 - 57934

27178