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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_10540_10787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10540 - 10787

Intron Length:

248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTATTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTTAA

U12 Branch Point Sequence:

GCCACCTTAACC

Flanking Amino Acid:

RAYRKHFLGKDHLNFYCTAS

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

60.9

0.27

51.6

Major PPT

81.9

0.72

0.7

77.4

30.1

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

69.1

0.58

1.4

67.92

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005197

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019806

1222 - 22036

20815

ENSAPLT00000005432

6645 - 23369

16725

ENSAPLT00000043527

6645 - 22036

15392

ENSAPLT00000021154

6645 - 23014

16370