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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_11756_12724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11756 - 12724

Intron Length:

969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCACTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GTTTGTTTCACT

Flanking Amino Acid:

LKFNPVLYPKASQMIVSYDE

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

82.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

80.1

0.68

0.9

71.2

39.6

Minor 5ss

31.4

-2.1

3.2

42.1

Minor BPS

56.3

0.28

2.2

80.14

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005197

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021154

6645 - 23014

16370

ENSAPLT00000019806

1222 - 22036

20815

ENSAPLT00000005432

6645 - 23369

16725

ENSAPLT00000043527

6645 - 22036

15392