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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_1228_9164_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1228 - 9164

Intron Length:

7937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGAGAT

U12 Branch Point Sequence:

TTCGGTTGGACA

Flanking Amino Acid:

MKSAEFFEMLEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

74.9

35.3

Major BPS

46.1

-0.2

1.2

38.2

41.7

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

27.6

-2.6

32.2

42.5

Minor BPS

45.3

-0.3

58.17

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005197

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019806

1222 - 22036

20815