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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_12809_13712_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12809 - 13712

Intron Length:

904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTCCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CCCTTCTGAGAT

Flanking Amino Acid:

FGVIYQKFRQTQEEELFGNN

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

69.4

0.44

0.9

62.9

39.6

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

45.4

-0.2

1.8

57.14

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005197

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019806

1222 - 22036

20815

ENSAPLT00000005432

6645 - 23369

16725

ENSAPLT00000043527

6645 - 22036

15392

ENSAPLT00000021154

6645 - 23014

16370