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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_15716_16031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15716 - 16031

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TGCTATTCAGCC

Flanking Amino Acid:

PLPSPPVFQKSPEFREFLLT

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

74.6

0.55

0.8

65.8

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

45.6

-0.3

1.9

56.34

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005197

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021154

6645 - 23014

16370

ENSAPLT00000019806

1222 - 22036

20815

ENSAPLT00000005432

6645 - 23369

16725

ENSAPLT00000043527

6645 - 22036

15392