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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_16119_16386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16119 - 16386

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGCTC

5'SS Class:

major

3'SS Sequence:

TGTCACTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

CCGCCTGTCACT

Flanking Amino Acid:

CKSDKFAKLEDRTRAALLDN

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

67.8

43.5

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

71.6

0.49

0.9

62.2

39.5

Minor 5ss

40.9

-1

3.4

59.1

45.6

Minor BPS

42.3

-0.5

2.3

56.01

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005197

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021154

6645 - 23014

16370

ENSAPLT00000019806

1222 - 22036

20815

ENSAPLT00000005432

6645 - 23369

16725

ENSAPLT00000043527

6645 - 22036

15392