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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_177608_186526_R

Intron Information:

Intron Rank:

132111

Intron Class:

major

Intron Phase:

Intron Coordinates:

177608 - 186526

Intron Length:

8919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTAAATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATCTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

67.8

39.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.8

0.6

71.4

37.5

Minor 5ss

30.8

-2.2

31.1

42.4

Minor BPS

66.9

0.61

1.3

79.65

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018323

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038201

177231 - 187207

9977