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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_194849_194926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

194849 - 194926

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGGGCA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTGACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCCAAT

U12 Branch Point Sequence:

TTTTTCCTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

60.8

38.2

Major BPS

50.5

0.01

1.3

58.7

35.9

Major PPT

83.6

0.76

0.9

80.7

31.5

Minor 5ss

31.7

-2.1

3.6

44.4

44.2

Minor BPS

69.4

0.61

1.6

82.95

30.8

Associated Gene:

Gene:

WSCD1

Ensembl Gene ID:

ENSAPLG00000006092

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006322

194618 - 216061

21444