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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_195278_198613_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

195278 - 198613

Intron Length:

3336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TGCATGCACATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

ATTTCCTGACTC

Flanking Amino Acid:

KAMKRTAEHKGTYMGCFSDD

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

62.5

0.31

1.2

38.9

Major PPT

56.9

0.16

50.2

38.4

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

61.8

0.35

1.7

73.7

37.2

Associated Gene:

Gene:

WSCD1

Ensembl Gene ID:

ENSAPLG00000006092

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039019

194618 - 216061

21444

ENSAPLT00000006322

194618 - 216061

21444