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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_198729_200003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198729 - 200003

Intron Length:

1275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCACCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CTGTGTTTCATT

Flanking Amino Acid:

VSHCQEACAERAYTYAGLAY

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

32.7

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

65.6

0.35

0.9

57.8

32.1

Minor 5ss

-1.9

3.5

48.2

47.9

Minor BPS

47.4

-0.1

2.2

66.43

45.5

Associated Gene:

Gene:

WSCD1

Ensembl Gene ID:

ENSAPLG00000006092

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039019

194618 - 216061

21444

ENSAPLT00000006322

194618 - 216061

21444