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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000236.1_200189_203221_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

200189 - 203221

Intron Length:

3033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTGGG

5'SS Class:

major

3'SS Sequence:

CATATCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

GTTTTCTCAAGA

Flanking Amino Acid:

VEELWAAAPRRRNVIYRGCF

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.3

67.1

44.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.54

0.9

66.5

35.2

Minor 5ss

33.5

-1.9

3.2

39.4

39.7

Minor BPS

58.9

0.28

1.9

Associated Gene:

Gene:

WSCD1

Ensembl Gene ID:

ENSAPLG00000006092

Chromosome:

PEDO01000236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039019

194618 - 216061

21444

ENSAPLT00000006322

194618 - 216061

21444